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BCBC Genomics Studies Collection

This collection holds studies that contain information about genes expressed in cells of the pancreas and their transcriptional regulation. Pancreatic genes were also identified by microarray analysis of pancreatic tissues.

Your access level

  BCBC 3.0 Investigators & Co-Investigators 115
  BCBC 3.0 Affiliates 115
  Alumni Investigators 107
Your access level Public 107

Study ID Study name Tags Access
4314 Transcriptional and epigenetic profiling of the progression of hESCs to beta cells Restricted
4294 Transcriptional profiling of Insm1-dependent pancreatic endocrine differentiation Restricted
4275 Whole transcriptome analysis of Sox17.Epi and Endo cells in mouse embryos Restricted
4263 Gene expression profiling of wild-type, Nkx2.2 null, NeuroD null and Nkx2.2/NeuroD double KO E13.5 pancreata Restricted
4258 Functional analysis of the Nkx2.2 SD domain: gene expression profiling of E16.5 Nkx2.2 SD mutant pancreata versus wild-type littermate pancreata Restricted
4235 Open chromatin in human pancreatic islets (FAIRE-seq) - Appendix Viewable
4216 Gene expression profiling of hESC derived eGFP-SOX17+ endoderm cells Viewable
4195 Transcriptional Profiling of Ngn3-dependent endocrine progenitors and pre-beta cells Restricted
4175 Pancreatic beta cell identity is maintained by DNA methylation-mediated repression of Arx Viewable
4135 Transcriptional profiling of mouse pancreatic beta-cells, embryonic stem cells and 10 other normal adult tissues affymetrix mouse genome 430 2.0 array Viewable
4114 Chromatin immunoprecipitation of mouse pancreatic beta and acinar cells, embryonic stem cells, Pdx1-expressing endocrine progenitors and 10 other normal adult tissues affymetrix genechip mouse promoter 1.0r array, h3k27me3, h3k4me3, lhx1, rest, tox3 Viewable
4078 Global epigenomic analysis of primary human pancreatic islets provides insights into type 2 diabetes susceptibility loci ctcf, dnasei, h3k4me1, h3k4me3, h3k79me2, tcf7l2 Viewable
4075 Open chromatin in human pancreatic islets (FAIRE-seq) ctcf, faire-seq, tcf7l2 Viewable
4014 Ptf1a-dependent gene expression during pancreas development (TLDA part) Restricted
3994 Ptf1a and RbpjL ChIP-Seq for adult mouse pancreas ptf1a, rbpjl Viewable
3980 CD40 activation in human pancreatic islets Viewable
3979 ChIP-on-chip of Pdx1 binding in Min6 cells Viewable
3977 Pdx1 Min6 siRNA Viewable
3975 8-12 week old Pdx1+/- vs Pdx1+/+ mouse littermates pdx1 Viewable
3935 Ptf1a-dependent gene expression during pancreas development (RNA-Seq part) Restricted

We invite you to submit your study for inclusion into Beta Cell Genomics. We will help curate your study so that is can be easily accessed and compared to the many other studies available at this site. View our data submission page for details