EPConDB


EPConDB is a resource of the Beta Cell Biology Consortium and contains information about genes expressed in cells of the pancreas and their transcriptional regulation. Pancreatic genes were also identified by microarray analysis of pancreatic tissues. Microarray chips based on these pancreatic genes (PancChip and PromoterChip) have been developed. These chips are described and results of their usage presented.

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bulletEPConDB Official Website (external website)
bulletBrowse list of microarray studies available (42 studies available)

Microarray studies available to BCBC members through RAD

You are viewing 42 public studies. To view the 4 additional private BCBC studies, you must be logged in.

Public Studies Available from EPConDB
  Title, Description, Link & Category Contact
array
Foxa2 controls vesicle docking and insulin secretion in mature beta-cells
Category: Targets and roles of transcriptional regulators
Klaus Kaestner University of Pennsylvania
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Neurogenin3 deficiency and Embryonic Pancreatic Gene Expression
Category: Pancreas development and growth
R Scott Heller Hagedorn Research Institute
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Sox4 null mice e12.5 pancreas
Category: Pancreas development and growth
Michael German University of California, San Francisco
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Richard A. Young Whitehead Institute MIT
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Survivin transgenic mice pancreatic islet profile
Category: Pancreas development and growth
Dario C. Altieri University of Massachusetts Medical School
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Inducible Ngn3 Embryonic Stem Cells
Category: Targets and roles of transcriptional regulators
Nathan R. Treff RMA of NJ
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Beta Cell Growth in Tcf-1 Deficient Mice
Category: Targets and roles of transcriptional regulators
Markus Stoffel The Rockefeller University
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Klaus Kaestner University of Pennsylvania
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ChIP-Chip and SACO Analysis of Pdx-1 binding in NIT-1 Insulinoma Cells
Category: Targets and roles of transcriptional regulators
Richard Goodman Oregon Health and Science University
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T Cell Mediated B-cell Damage and Repair in NOD Mice.
Category: Cell stimulation/injury; Islet/beta-cell stimulation/injury
Jonathan D. Katz University of Cincinnati
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Innocuous vs. Destructive Insulinitis
Category: Cell stimulation/injury; Islet/beta-cell stimulation/injury
Christophe Benoist Joslin Diabetes Center and Harvard Medical School
array
Brown preadipocyte IRS knockout profiling 1
Category: Cell differentiation
Ronald C Kahn Joslin Diabetes Center and Harvard Medical School
array
PANDER Induced Cell-Death Networks in Pancreatic Islets
Category: Cell stimulation/injury; Islet/beta-cell stimulation/injury
Bryan A. Wolf Childrens Hospital of Philadelphia
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Gene Expression Survey of Transcription Factors using RT-PCR
Category: Tissue expression, surveys and comparisons
Galvin H. Swift University of Texas Southwestern Medical Center
array
Human pancreatic islets from normal and Type 2 diabetic subjects
Category: Cell stimulation/injury; Islet/beta-cell stimulation/injury
Ronald C Kahn Joslin Diabetes Center and Harvard Medical School
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Human Tissue Survey From Massively Parallel Signature Sequencing (MPSS)
Category: Tissue expression, surveys and comparisons
C. Victor Jongeneel Ludwig Institute for Cancer Research
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Identification of novel cytokine induced genes in rat pancreatic beta-cells
Category: Cell stimulation/injury; Islet/beta-cell stimulation/injury
Decio L. Eizirik Universite Libre de Bruxelles
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Cytokine-induced and nuclear factor-kappa B-dependent genes in primary rat beta-cells
Category: Cell stimulation/injury; Islet/beta-cell stimulation/injury
Decio L. Eizirik Universite Libre de Bruxelles
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Cytokine induced dysfunction and apoptosis in insulin producing INS1 Cells
Category: Cell stimulation/injury; Islet/beta-cell stimulation/injury
Decio L. Eizirik Universite Libre de Bruxelles
array
Global profiling of double stranded RNA- and IFN-gamma-induced genes in rat pancreatic beta cells.
Category: Cell stimulation/injury; Islet/beta-cell stimulation/injury
Decio L. Eizirik Universite Libre de Bruxelles
array
Cyclophosphamide-induced beta Cell Destruction in NOD Mice
Category: Cell stimulation/injury; Islet/beta-cell stimulation/injury
Christophe Benoist Joslin Diabetes Center and Harvard Medical School
array
Doris A. Stoffers University of Pennsylvania
array
Overexpression of Neurogenin3 in Mpac mouse ductal cells
Category: Targets and roles of transcriptional regulators
Caroline Mrejen
array
Affymetrix MOE430v2 vs Mouse PancChip 5.0 comparison
Category: Tissue expression, surveys and comparisons
Klaus Kaestner University of Pennsylvania
array
Microarray Analysis of MIN6 cells treated with Exendin-4 over time.
Category: Cell stimulation/injury; Islet/beta-cell stimulation/injury
Anna L. Nolan Massachusetts General Hospital/HHMI
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Expression profiles of novel pancreatic cell lines.
Category: Cell differentiation; Differentiation of insulin-producing cells: cultures to generate insulin-producing cells
Mark A. Magnuson Vanderbilt University
array
Guoqiang Gu
array
HNF4alpha in beta cell function
Category: Targets and roles of transcriptional regulators
Klaus Kaestner University of Pennsylvania
array
foxA1 and beta cell function
Category: Cell stimulation/injury; Islet/beta-cell stimulation/injury; Targets and roles of transcriptional regulators
Klaus Kaestner University of Pennsylvania
array
Lipotoxicity Study of Rat INS1 cell lines
Category: Cell stimulation/injury; Islet/beta-cell stimulation/injury
Klaus Kaestner University of Pennsylvania
array
GSIS Study of Rat INS1 cell lines
Category: Cell stimulation/injury; Islet/beta-cell stimulation/injury
Klaus Kaestner University of Pennsylvania
array
Cytotoxicity Study of Rat INS1 cell lines
Category: Cell stimulation/injury; Islet/beta-cell stimulation/injury
Christopher B. Newgard Duke University
array
Microarray analysis of in vitro differentiation of adult human pancreatic progenitor cells
Category: Cell differentiation; Differentiation of insulin-producing cells: cultures to generate insulin-producing cells
Joel F. Habener Massachusetts General Hospital/HHMI
array
Nestin positive cells vs human islets
Category: Cell differentiation; Differentiation of insulin-producing cells: cultures to generate insulin-producing cells
Joel F. Habener Massachusetts General Hospital/HHMI
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LCM human islet beta cells
Category: Tissue expression, surveys and comparisons
Gordon Weir Harvard University
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Gene expression in normal mouse tissues
Category: Tissue expression, surveys and comparisons
John Hutton University of Colorado Health Sciences Center
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Identification of Tissue Restricted and Interferon alpha Regulated Transcripts in Human Islet Tissue
Category: Cell stimulation/injury; Islet/beta-cell stimulation/injury
Paul E. Harris Columbia Unversity
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Human pancreatic cultures
Category: Cell differentiation; Differentiation of insulin-producing cells: cultures to generate insulin-producing cells
Susan Bonner-Weir Harvard University
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Panc-1 Cell Differentiation
Category: Cell differentiation; Differentiation of insulin-producing cells: cultures to generate insulin-producing cells
Marvin Gershengorn NIDDK Intramural
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Suspension Differentiation of fibroblast-like pancreatic progenitors
Category: Cell differentiation; Differentiation of insulin-producing cells: cultures to generate insulin-producing cells
Lucas Chase Stem Cell Institute
array
Beta cell specific ablation of Foxa2 (HNF-3b) in mice
Category: Targets and roles of transcriptional regulators
Klaus Kaestner University of Pennsylvania
array
Pancreatic developmental time series
Category: Pancreas development and growth
Klaus Kaestner University of Pennsylvania
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