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Human skeletal muscle - type 2 diabetes and family history positive individuals - Mexican American - Study GBCO2363


Genomics Study Specifications

Study Name Human skeletal muscle - type 2 diabetes and family history positive individuals - Mexican American
Contact Name Mary-Elizabeth Patti (Joslin Diabetes Center and Harvard Medical School)
Publication http://www.ncbi.nlm.nih.gov/pubmed/12832613
My Strategies Return to My Strategies page
Classification Cell stimulation/injury
Links
BCBC Release Date April 13, 2009
Public Release Date April 13, 2009
Citation Patti ME, Butte AJ, Crunkhorn S, Cusi K, Berria R, Kashyap S, Miyazaki Y, Kohane I, Costello M, Saccone R, Landaker EJ, Goldfine AB, Mun E, DeFronzo R, Finlayson J, Kahn CR, Mandarino LJ. Coordinated reduction of genes of oxidative metabolism in humans with insulin resistance and diabetes: Potential role of PGC1 and NRF1. Proc Natl Acad Sci U S A. 2003. 100:8466-71
Synopsis
Type 2 diabetes mellitus (DM) is characterized by insulin resistance and pancreatic beta-cell dysfunction. In high-risk subjects, the earliest detectable abnormality is insulin resistance in skeletal muscle. Impaired insulin-mediated signaling, gene expression, and glycogen synthesis, and accumulation of intramyocellular triglycerides have all been linked with insulin resistance, but no specific defect responsible for insulin resistance and DM has been identified in humans. To identify genes potentially important in the pathogenesis of DM, we analyzed gene expression in skeletal muscle from healthy metabolically characterized nondiabetic (family history negative and positive for DM) and diabetic Mexican-American subjects. We demonstrate that insulin resistance and DM associate with reduced expression of multiple nuclear respiratory factor-1 (NRF-1)-dependent genes encoding key enzymes in oxidative metabolism and mitochondrial function. While NRF-1 expression is decreased only in diabetic subjects, expression of both PPARg coactivator 1-alpha and -beta (PGC1-a/PPARGC1, and PGC1-b/PERC), coactivators of NRF-1 and PPARg-dependent transcription, is decreased in both diabetic subjects and family history positive nondiabetic subjects. Decreased PGC1 expression may be responsible for decreased expression of NRFdependent genes, leading to the metabolic disturbances characteristic of insulin resistance and DM.
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Platform types Expression microarray, Expression
Platforms Show platform Affymetrix HuGeneFL
Study Design Type
  • disease_state_design
  • family_history_design
  • replicate_design
Study Factors Show study factors
Study Assays Show study assays


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Repositories

Stoeckert Lab
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Approved on Apr 13, 2009
Last modified on Aug 02, 2011
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