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BCBC Genomics Studies Collection


Search results for Studies contributed by investigator: "Stoeckert, Christian"
Study ID Study name Tags Access
670 Panc-1 Cell Differentiation differentiation Viewable
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710 Human pancreatic cultures human, pancreas Viewable
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731 Mouse NeuroD null (pancreas, islet, brain) Viewable
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751 Identification of Tissue Restricted and Interferon alpha Regulated Transcripts in Human Islet Tissue Viewable
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790 Gene expression in normal mouse tissues Viewable
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810 LCM human islet beta cells Viewable
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830 Nestin positive cells vs human islets Viewable
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870 Microarray analysis of in vitro differentiation of adult human pancreatic progenitor cells Viewable
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1330 Mouse pancreas development (Hutton/Juhl) Viewable
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1770 Serum starvation effects on human Islet-derived Precursor Cells Viewable
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2000 Cyclophosphamide-induced beta Cell Destruction in NOD Mice Viewable
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2001 Global profiling of double stranded RNA- and IFN-gamma-induced genes in rat pancreatic beta cells. Viewable
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2002 Cytokine induced dysfunction and apoptosis in insulin producing INS1 Cells Ins1 Viewable
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2020 Cytokine-induced and nuclear factor-kappa B-dependent genes in primary rat beta-cells Viewable
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2021 Identification of novel cytokine induced genes in rat pancreatic beta-cells Viewable
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2060 Human Tissue Survey From Massively Parallel Signature Sequencing (MPSS) Viewable
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2160 Human pancreatic islets from normal and Type 2 diabetic subjects Affymetrix HG-U133A, Affymetrix HG-U133B, Akt2 thymoma viral proto-oncogene 2, alpha, ARNT, Arnt, aryl hydrocarbon receptor nuclear translocator, glucose phosphate isomerase, GPI, hepatic nuclear factor 4, HIF1B, HIF1BETA, Hnf4a, Insr, insulin receptor, insulin receptor substrate 2, Irs2 Viewable
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2330 Brown preadipocyte IRS knockout profiling 1 Viewable
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2421 Innocuous vs. Destructive Insulinitis Affymetrix MG_U74Av2, killer cell lectin-like receptor, killer cell lectin-like receptor subfamily A, killer cell lectin-like receptor subfamily B member 1A, killer cell lectin-like receptor subfamily B member 1C, Klra13, Klra3, Klra8, Klrb1a, Klrb1c, Ly49c, Ly49h, Ly49M, member 13, member 3, member 8, Nkrp1a, Nkrp1c, subfamily A Viewable
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2440 T Cell Mediated B-cell Damage and Repair in NOD Mice. Affymetrix MG_U74Av2, Il17, Il17a, Il6, Il-6, interleukin 17A, interleukin 6, Reg3a, Reg3b, Reg3g, regenerating islet-derived 3 alpha, regenerating islet-derived 3 beta, regenerating islet-derived 3 gamma, Tnf, TNF-alpha, tumor necrosis factor Viewable
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2480 ChIP-Chip and SACO Analysis of Pdx-1 binding in NIT-1 Insulinoma Cells BETA2, Mouse PromoterChip 5B.0, Neurod1, neurogenic differentiation 1, pancreatic and duodenal homeobox 1, Pdx1, SACO Viewable
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2541 Beta Cell Growth in Tcf-1 Deficient Mice Affymetrix MG_U74Av2, GSE3544, Hnf1a, Hnf1-alpha, HNF1 homeobox A, Tcf1, Tmem27, transmembrane protein 27 Viewable
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2800 Inducible Ngn3 Embryonic Stem Cells Affymetrix Mouse430 2.0, Neurog3, neurogenin 3, Ngn3, ngn3, Sim1, single-minded homolog 1 (Drosophila) Viewable
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2904 Survivin transgenic mice pancreatic islet profile Affymetrix Mouse430 2.0, baculoviral IAP repeat-containing 5, Birc5, early growth response 1, Egr1, Egr-1, heat shock protein 1B, Hsp70, Hspa1b, Socs3, SOCS-3, suppressor of cytokine signaling 3, survivin40 Viewable
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2929 Genome-wide location analysis of HNF Transcription Factors in Hepatocytes and Pancreatic Islets alpha, hepatocyte nuclear factor 4, HNF1A, HNF1 homeobox A, HNF4A, HNF6, Hu13K 2, ONECUT1, one cut homeobox 1, Santa Cruz Ab sc-6547, Santa Cruz Ab sc-6556, Santa Cruz cs-8987, test3 Viewable
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3144 Expression data from NOD-scid vs B6-scid pancreas, submandibular glands, & lacrimal glands Affymetrix MG_U74Av2, Affymetrix MG_U74Bv2, Affymetrix MG_U74Cv2, Gcg, glucagon, Iapp, ins1, Ins1, insulinI, islet amyloid polypeptide Rhoq, kallikrein related-peptidase 8, Klk8, member Q Ren1, ras homolog gene family, renin 1 structural Viewable
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3244 Transcriptional profiling of stress-response in cultured porcine islets APOC3, apolipoprotein C-III TTR, CCAAT/enhancer binding protein (C/EBP), Cebpd, C/EBPd, delta, Pig_Array_Ready Oligo set v1.0, protein-glutamine-gamma-glutamyltransferase), TGM2, thioredoxin interacting protein, transglutaminase 2 (C polypeptide, transthyretin MARCKS myristoylated alanine-rich protein kinase C substrate, TXNIP Viewable
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3407 A Gene Expression Network Model of Type 2 Diabetes Links Cell Cycle Bmp1, bone morphogenetic protein 1, Diabetes, Gdf10, growth differentiation factor 10, Igf2, Igf2bp1, insulin-like growth factor 2, insulin-like growth factor 2 mRNA binding protein 1, nerve growth factor, Ngf, Rosetta/Merck Mouse 44k 1.0 microarray Viewable
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3425 Ngn3-mediated differentiation of mouse embryonic stem cells into endocrine pancreas progenitors. Affymetrix MOE430A, Dll1 delta-like 1 (Drosophila), IA-1, Insm1, insulinoma-associated 1, locus 2 (Drosophila), Neurod, Neurod1, Neurog3, neurogenic differentiation 1, neurogenin 3, ngn3, Ngn3, ngn3 esc, NK2 transcription factor related, Nkx2-2, Nkx2.2, paired box gene 4, Pax4 Viewable
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3546 Gene expression analysis of control versus VHLH KO islets Affymetrix Mouse430 2.0, Aldoa, aldolase A, alpha non-neuron, alpha subunit, Eno1, enolase 1, fructose-bisphosphate, Gapdhg, glyceraldehyde-3-phosphate dehydrogenase, Gpi1g, Hif1a, hypoxia inducible factor 1, isoenzyme 1, lactate dehydrogenase A, Ldha, lucose phosphate isomerase 1, member 1, Pdk1, Pgam1, Pgk1, phosphoglycerate kinase 1, phosphoglycerate mutase 1, pyruvate dehydrogenase kinase, Slc2a1, solute carrier family 2 (facilitated glucose transporter), Tpi1, triosephosphate isomerase 1, Vhl, Vhlh, von Hippel-Lindau syndrome Viewable
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3627 Detailed transcriptome atlas of the pancreatic beta cell Affymetrix GeneChip Rat Genome 230 2.0 Array, GCG, glucagon, INS, insulin, PAX6, somatostatin, SST Viewable
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3203 Gene expression in PBMCs from children with diabetes Viewable
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2424 NOD Mouse Model of Type 1 Diabetes Viewable
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2423 AIRE-deficient Mice and Autoimmune Disease Viewable
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2401 3T3-L1 Adipocyte Differentiation - Time Course Viewable
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2400 3T3-L1 Fibroblast Cells, 3T3-L1 Adipocyte Cells, and Mouse Skeletal Viewable
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2381 Effect of PGC-1alpha and PGC-1beta on gene expression in myocytes and hepatocytes Viewable
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2380 Transcription profiling of wild type and PGC-1alpha KO liver and skeletal muscle Viewable
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2363 Human skeletal muscle - type 2 diabetes and family history positive individuals - Mexican American Viewable
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2360 Human skeletal muscle - type 2 diabetes - Swedish males Viewable
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2346 Low and High Fat Diet on Mice of Two Genetic Backgrounds (B6 vs. 129) - Skeletal Muscle Viewable
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2345 IR and IRS-1 Single and Double Heterozygous Knockouts - Epididymal White Fat Viewable
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2344 Low and High Fat Diet on Mice of Two Genetic Backgrounds (B6 vs. 129) - Fat Viewable
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2343 IR and IRS-1 Single and Double Heterozygous Knockouts - Skeletal Muscle Viewable
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2342 IR and IRS-1 Single and Double Heterozygous Knockouts - Liver Viewable
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2341 Effect of insulin infusion on skeletal muscle Viewable
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2340 Liver - ob/ob mice Viewable
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2336 Skeletal Muscle Insulin Receptor Knockout - Control, Streptozotocin Diabetic and Insulin Treated Viewable
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2335 Mouse skeletal muscle - controls, streptozotocin diabetes and insulin treated Viewable
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2334 Low and High Fat Diet on Mice of Two Genetic Backgrounds (B6 vs. 129) - Liver Viewable
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2333 Fat and Normal adipocytes from insulin receptor knockout mice sorted into small and large cells Viewable
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3650 Rat pancreatic gene expression after culture in increasing glucose levels Affymetrix GeneChip Rat Genome 230 2.0 Array, Aldob, Crem, Dbp, Ddit3, Fas, Fos, Hmox1, Mt1aH, Srebf1, Srebf2, Trib3, Txnip Viewable
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3754 Meta analysis of gene expression in human islets after in vitro expansion CDH1, CDH2, E-cadherin, Foxa2, HGU133 Plus 2.0 Affymetrix array, INHBA, ISL1, N-cadherin, NEUROD1, NKX2-2, NOG, noggin, PAX6, SNAI2, TWIST2 Viewable
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3795 Neurogenin3 Is Sufficient for Transdetermination of Hepatic Progenitor Cells into Neo-Islets In Vivo but Not Transdifferentiation of Hepatocytes Abcc8, Btc, Eef1g, Gapdh, Gcg, Ins1, Ins2, Isl1, Kcnj11, Neurod1, Neurog3, Nkx2-2, Nkx6-1, Pax4, Pax6, Pcsk1, Pcsk2, Pdx1, Ppy, Sst, Thy1 Viewable
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3815 Small molecule inducers of pancreatic beta-cell expansion Ccnd2, Egr1, Egr2, Fos, Fosb, Ier2, Ins1, Ins2, Irs2, Jun, Junb, Pdx1, Rasgef1b, Rasgrf1 Viewable
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3980 CD40 activation in human pancreatic islets CCL2, CCL4, CD40, CXCL1, CXCL2, CXCL3, IFNG, IL1B, MCP-1, MIP-1beta, TNF-alpha Viewable
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850 GNF large-scale survey of human and mouse tissues Viewable
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4075 Open chromatin in human pancreatic islets (FAIRE-seq) ctcf, faire-seq, tcf7l2 Viewable
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4078 Global epigenomic analysis of primary human pancreatic islets provides insights into type 2 diabetes susceptibility loci ctcf, dnasei, h3k4me1, h3k4me3, h3k79me2, tcf7l2 Viewable
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