BCBC Genomics Studies Collection
Search results for Studies contributed by investigator: "Stoeckert, Christian"
| Study ID | Study name | Tags | Access |
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| 670 | Panc-1 Cell Differentiation | differentiation |
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| 710 | Human pancreatic cultures | human, pancreas |
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| 731 | Mouse NeuroD null (pancreas, islet, brain) |
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| 751 | Identification of Tissue Restricted and Interferon alpha Regulated Transcripts in Human Islet Tissue |
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| 790 | Gene expression in normal mouse tissues |
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| 810 | LCM human islet beta cells |
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| 830 | Nestin positive cells vs human islets |
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| 870 | Microarray analysis of in vitro differentiation of adult human pancreatic progenitor cells |
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| 1330 | Mouse pancreas development (Hutton/Juhl) |
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| 1770 | Serum starvation effects on human Islet-derived Precursor Cells |
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| 2000 | Cyclophosphamide-induced beta Cell Destruction in NOD Mice |
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| 2001 | Global profiling of double stranded RNA- and IFN-gamma-induced genes in rat pancreatic beta cells. |
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| 2002 | Cytokine induced dysfunction and apoptosis in insulin producing INS1 Cells | Ins1 |
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| 2020 | Cytokine-induced and nuclear factor-kappa B-dependent genes in primary rat beta-cells |
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| 2021 | Identification of novel cytokine induced genes in rat pancreatic beta-cells |
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| 2060 | Human Tissue Survey From Massively Parallel Signature Sequencing (MPSS) |
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| 2160 | Human pancreatic islets from normal and Type 2 diabetic subjects | Affymetrix HG-U133A, Affymetrix HG-U133B, Akt2 thymoma viral proto-oncogene 2, alpha, ARNT, Arnt, aryl hydrocarbon receptor nuclear translocator, glucose phosphate isomerase, GPI, hepatic nuclear factor 4, HIF1B, HIF1BETA, Hnf4a, Insr, insulin receptor, insulin receptor substrate 2, Irs2 |
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| 2330 | Brown preadipocyte IRS knockout profiling 1 |
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| 2421 | Innocuous vs. Destructive Insulinitis | Affymetrix MG_U74Av2, killer cell lectin-like receptor, killer cell lectin-like receptor subfamily A, killer cell lectin-like receptor subfamily B member 1A, killer cell lectin-like receptor subfamily B member 1C, Klra13, Klra3, Klra8, Klrb1a, Klrb1c, Ly49c, Ly49h, Ly49M, member 13, member 3, member 8, Nkrp1a, Nkrp1c, subfamily A |
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| 2440 | T Cell Mediated B-cell Damage and Repair in NOD Mice. | Affymetrix MG_U74Av2, Il17, Il17a, Il6, Il-6, interleukin 17A, interleukin 6, Reg3a, Reg3b, Reg3g, regenerating islet-derived 3 alpha, regenerating islet-derived 3 beta, regenerating islet-derived 3 gamma, Tnf, TNF-alpha, tumor necrosis factor |
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| 2480 | ChIP-Chip and SACO Analysis of Pdx-1 binding in NIT-1 Insulinoma Cells | BETA2, Mouse PromoterChip 5B.0, Neurod1, neurogenic differentiation 1, pancreatic and duodenal homeobox 1, Pdx1, SACO |
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| 2541 | Beta Cell Growth in Tcf-1 Deficient Mice | Affymetrix MG_U74Av2, GSE3544, Hnf1a, Hnf1-alpha, HNF1 homeobox A, Tcf1, Tmem27, transmembrane protein 27 |
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| 2800 | Inducible Ngn3 Embryonic Stem Cells | Affymetrix Mouse430 2.0, Neurog3, neurogenin 3, Ngn3, ngn3, Sim1, single-minded homolog 1 (Drosophila) |
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| 2904 | Survivin transgenic mice pancreatic islet profile | Affymetrix Mouse430 2.0, baculoviral IAP repeat-containing 5, Birc5, early growth response 1, Egr1, Egr-1, heat shock protein 1B, Hsp70, Hspa1b, Socs3, SOCS-3, suppressor of cytokine signaling 3, survivin40 |
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| 2929 | Genome-wide location analysis of HNF Transcription Factors in Hepatocytes and Pancreatic Islets | alpha, hepatocyte nuclear factor 4, HNF1A, HNF1 homeobox A, HNF4A, HNF6, Hu13K 2, ONECUT1, one cut homeobox 1, Santa Cruz Ab sc-6547, Santa Cruz Ab sc-6556, Santa Cruz cs-8987, test3 |
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| 3144 | Expression data from NOD-scid vs B6-scid pancreas, submandibular glands, & lacrimal glands | Affymetrix MG_U74Av2, Affymetrix MG_U74Bv2, Affymetrix MG_U74Cv2, Gcg, glucagon, Iapp, ins1, Ins1, insulinI, islet amyloid polypeptide Rhoq, kallikrein related-peptidase 8, Klk8, member Q Ren1, ras homolog gene family, renin 1 structural |
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| 3244 | Transcriptional profiling of stress-response in cultured porcine islets | APOC3, apolipoprotein C-III TTR, CCAAT/enhancer binding protein (C/EBP), Cebpd, C/EBPd, delta, Pig_Array_Ready Oligo set v1.0, protein-glutamine-gamma-glutamyltransferase), TGM2, thioredoxin interacting protein, transglutaminase 2 (C polypeptide, transthyretin MARCKS myristoylated alanine-rich protein kinase C substrate, TXNIP |
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| 3407 | A Gene Expression Network Model of Type 2 Diabetes Links Cell Cycle | Bmp1, bone morphogenetic protein 1, Diabetes, Gdf10, growth differentiation factor 10, Igf2, Igf2bp1, insulin-like growth factor 2, insulin-like growth factor 2 mRNA binding protein 1, nerve growth factor, Ngf, Rosetta/Merck Mouse 44k 1.0 microarray |
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| 3425 | Ngn3-mediated differentiation of mouse embryonic stem cells into endocrine pancreas progenitors. | Affymetrix MOE430A, Dll1 delta-like 1 (Drosophila), IA-1, Insm1, insulinoma-associated 1, locus 2 (Drosophila), Neurod, Neurod1, Neurog3, neurogenic differentiation 1, neurogenin 3, ngn3, Ngn3, ngn3 esc, NK2 transcription factor related, Nkx2-2, Nkx2.2, paired box gene 4, Pax4 |
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| 3546 | Gene expression analysis of control versus VHLH KO islets | Affymetrix Mouse430 2.0, Aldoa, aldolase A, alpha non-neuron, alpha subunit, Eno1, enolase 1, fructose-bisphosphate, Gapdhg, glyceraldehyde-3-phosphate dehydrogenase, Gpi1g, Hif1a, hypoxia inducible factor 1, isoenzyme 1, lactate dehydrogenase A, Ldha, lucose phosphate isomerase 1, member 1, Pdk1, Pgam1, Pgk1, phosphoglycerate kinase 1, phosphoglycerate mutase 1, pyruvate dehydrogenase kinase, Slc2a1, solute carrier family 2 (facilitated glucose transporter), Tpi1, triosephosphate isomerase 1, Vhl, Vhlh, von Hippel-Lindau syndrome |
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| 3627 | Detailed transcriptome atlas of the pancreatic beta cell | Affymetrix GeneChip Rat Genome 230 2.0 Array, GCG, glucagon, INS, insulin, PAX6, somatostatin, SST |
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| 3203 | Gene expression in PBMCs from children with diabetes |
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| 2424 | NOD Mouse Model of Type 1 Diabetes |
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| 2423 | AIRE-deficient Mice and Autoimmune Disease |
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| 2401 | 3T3-L1 Adipocyte Differentiation - Time Course |
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| 2400 | 3T3-L1 Fibroblast Cells, 3T3-L1 Adipocyte Cells, and Mouse Skeletal |
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| 2381 | Effect of PGC-1alpha and PGC-1beta on gene expression in myocytes and hepatocytes |
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| 2380 | Transcription profiling of wild type and PGC-1alpha KO liver and skeletal muscle |
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| 2363 | Human skeletal muscle - type 2 diabetes and family history positive individuals - Mexican American |
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| 2360 | Human skeletal muscle - type 2 diabetes - Swedish males |
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| 2346 | Low and High Fat Diet on Mice of Two Genetic Backgrounds (B6 vs. 129) - Skeletal Muscle |
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| 2345 | IR and IRS-1 Single and Double Heterozygous Knockouts - Epididymal White Fat |
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| 2344 | Low and High Fat Diet on Mice of Two Genetic Backgrounds (B6 vs. 129) - Fat |
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| 2343 | IR and IRS-1 Single and Double Heterozygous Knockouts - Skeletal Muscle |
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| 2342 | IR and IRS-1 Single and Double Heterozygous Knockouts - Liver |
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| 2341 | Effect of insulin infusion on skeletal muscle |
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| 2340 | Liver - ob/ob mice |
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| 2336 | Skeletal Muscle Insulin Receptor Knockout - Control, Streptozotocin Diabetic and Insulin Treated |
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| 2335 | Mouse skeletal muscle - controls, streptozotocin diabetes and insulin treated |
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| 2334 | Low and High Fat Diet on Mice of Two Genetic Backgrounds (B6 vs. 129) - Liver |
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| 2333 | Fat and Normal adipocytes from insulin receptor knockout mice sorted into small and large cells |
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| 3650 | Rat pancreatic gene expression after culture in increasing glucose levels | Affymetrix GeneChip Rat Genome 230 2.0 Array, Aldob, Crem, Dbp, Ddit3, Fas, Fos, Hmox1, Mt1aH, Srebf1, Srebf2, Trib3, Txnip |
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| 3754 | Meta analysis of gene expression in human islets after in vitro expansion | CDH1, CDH2, E-cadherin, Foxa2, HGU133 Plus 2.0 Affymetrix array, INHBA, ISL1, N-cadherin, NEUROD1, NKX2-2, NOG, noggin, PAX6, SNAI2, TWIST2 |
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| 3795 | Neurogenin3 Is Sufficient for Transdetermination of Hepatic Progenitor Cells into Neo-Islets In Vivo but Not Transdifferentiation of Hepatocytes | Abcc8, Btc, Eef1g, Gapdh, Gcg, Ins1, Ins2, Isl1, Kcnj11, Neurod1, Neurog3, Nkx2-2, Nkx6-1, Pax4, Pax6, Pcsk1, Pcsk2, Pdx1, Ppy, Sst, Thy1 |
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| 3815 | Small molecule inducers of pancreatic beta-cell expansion | Ccnd2, Egr1, Egr2, Fos, Fosb, Ier2, Ins1, Ins2, Irs2, Jun, Junb, Pdx1, Rasgef1b, Rasgrf1 |
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| 3980 | CD40 activation in human pancreatic islets | CCL2, CCL4, CD40, CXCL1, CXCL2, CXCL3, IFNG, IL1B, MCP-1, MIP-1beta, TNF-alpha |
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| 850 | GNF large-scale survey of human and mouse tissues |
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| 4075 | Open chromatin in human pancreatic islets (FAIRE-seq) | ctcf, faire-seq, tcf7l2 |
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| 4078 | Global epigenomic analysis of primary human pancreatic islets provides insights into type 2 diabetes susceptibility loci | ctcf, dnasei, h3k4me1, h3k4me3, h3k79me2, tcf7l2 |
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